PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000243.1_g000020.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 311aa    MW: 34056.7 Da    PI: 6.8443
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000243.1_g000020.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.85e-334195155
                     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                                kprlrWt +LHerFv+av+qLGG+ kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  Rmu_ssc0000243.1_g000020.1 41 KPRLRWTADLHERFVDAVTQLGGAAKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 95
                                79****************************************************8 PP
2Myb_DNA-binding66.16.5e-214394148
                                TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
             Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                                r+rWT++++e++vdav+qlGg    t+k+I+rtm+ kg+tl ++ks++qky+
  Rmu_ssc0000243.1_g000020.1 43 RLRWTADLHERFVDAVTQLGGAakaTPKAIMRTMNvKGLTLFHLKSHLQKYR 94
                                89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MFPRLMQPPP PPPPPPLDGI EDMQGHNHRA DPCLVLTSDP KPRLRWTADL HERFVDAVTQ  60
LGGAAKATPK AIMRTMNVKG LTLFHLKSHL QKYRLGKQAG KDMDEVSKDA SYLLESPGTG  120
NSSPNLATSD MNEGYEVKEA LRVQMEVQSK LHVQVEAEKH LQIRQDAERR YMAMLERACK  180
MLADQFIGGS VIDTDGHKYH GLGNKNPKSS SLDPLGFYSL QSIDVAGVHG PEEEVLTSVH  240
PQRADCSTES CLTSHESPGG LTLEGSPGGG KKRMLSLESA TASLIWGEAK VRTQEINLAP  300
VEPHGITRYG I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.11e-67G2-like family protein