PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000158.1_g000017.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 425aa MW: 46938.6 Da PI: 6.6267

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000158.1_g000017.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	28	7.1e-09	116	170	1	54
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrt 54 kfY+ Y++ +GFs+r+++ +k+ ng +++r++vCsk+g ++ + +k + +t Rmu_ssc0000158.1_g000017.1 116 KFYSLYSQILGFSMRRDRVQKE-GNGLVVRRQWVCSKQGVASIKCSKqkgvdkN----KT 170 6***************9998.8999**********998776663333320....22 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MDTDEGGLRY SDHNYHDRLS SDDESKDEMW IRVGQCTEVT MRTKDATKSI IPAESGDLRK 60 SPSAVEKEET LPESAIERTE YVNHTGSAQL NGKHFEDLTL DDMMGVYFPT VEEAEKFYSL 120 YSQILGFSMR RDRVQKEGNG LVVRRQWVCS KQGVASIKCS KQKGVDKNKT AKNEKIGEQK 180 KSRSSIIPRG FLRPNRRVED KDIAQVECLR HTQVHTSRAY EQLVEQVGGH DGVGFLMKHL 240 YNKIYEMRKN ADMDGDAQAA ITWMNMRGME SQKFCCSTYK TNLYRKPLVV FVGCNNRRTC 300 TAGEKGVPTT GNAASAVTVP HVEASSGSAP HVAASVPNLV HLSSYVAAAV PDPAASVPSS 360 ADLPHHPTAS VIDYGMELDF DDNGASRVGG IGQFLFFIAS QHSSSSGIPP FLFNLNQTAP 420 DDEGN

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MDTDEGGLRY SDHNYHDRLS SDDESKDEMW IRVGQCTEVT MRTKDATKSI IPAESGDLRK  60
SPSAVEKEET LPESAIERTE YVNHTGSAQL NGKHFEDLTL DDMMGVYFPT VEEAEKFYSL  120
YSQILGFSMR RDRVQKEGNG LVVRRQWVCS KQGVASIKCS KQKGVDKNKT AKNEKIGEQK  180
KSRSSIIPRG FLRPNRRVED KDIAQVECLR HTQVHTSRAY EQLVEQVGGH DGVGFLMKHL  240
YNKIYEMRKN ADMDGDAQAA ITWMNMRGME SQKFCCSTYK TNLYRKPLVV FVGCNNRRTC  300
TAGEKGVPTT GNAASAVTVP HVEASSGSAP HVAASVPNLV HLSSYVAAAV PDPAASVPSS  360
ADLPHHPTAS VIDYGMELDF DDNGASRVGG IGQFLFFIAS QHSSSSGIPP FLFNLNQTAP  420
DDEGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-06	FAR1 family protein