PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000150.1_g000038.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

CAMTA

Protein Properties

Length: 1129aa MW: 126834 Da PI: 6.6918

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000150.1_g000038.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	174	2e-54	141	255	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycy 84 +e + rwlk+ e++ iL+n+ek+++t e++++p sgsl+L+n++++r+fr+DG+ w+kkkdg+tv E+he+LKvg+ve+l+cy Rmu_ssc0000150.1_g000038.1 141 QEaQGRWLKPAEVLFILQNHEKYKVTPEPPQQPVSGSLFLFNKRILRFFRRDGHRWRKKKDGRTVGEAHERLKVGNVETLNCY 223 55589**************************************************************************** PP CG-1 85 YahseenptfqrrcywlLeeelekivlvhyle 116 Yah+e+np+fqrr+yw+L+ ++e+ivlvhy+e Rmu_ssc0000150.1_g000038.1 224 YAHGEDNPNFQRRSYWMLDPAYEHIVLVHYRE 255 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1129 aa Download sequence
MSKIPFWIFY RRFHRIDYTD QAAAHRLPPA NCVMPRRRMT RRRTLLRLGR AVTVGFVKPK 60 FKPGTVHCND VSGVIPVRRG CLGSPARARL AYNINDLFQE AQGRWLKPAE VLFILQNHEK 120 YKVTPEPPQQ PVRYNINDLF QEAQGRWLKP AEVLFILQNH EKYKVTPEPP QQPVSGSLFL 180 FNKRILRFFR RDGHRWRKKK DGRTVGEAHE RLKVGNVETL NCYYAHGEDN PNFQRRSYWM 240 LDPAYEHIVL VHYREISEVK PGTGSNIQSP VSSSTLSQSP ISNTTQHPGS VSMISELYEP 300 YTSPGSVEVS SDLVIKKNGR ESAENLYRTG ESDSSSKADV SQALRRLEEQ LSLNDDSFNE 360 FVDDNPDGSD TPEYPSDQFT AFHGQEHIVH DQFYSGHSLM QGNADNSSDI LDYHNDIVNQ 420 DQFTPFHGPE HIVNDQFYSG RAQMQSNVDL SGKHHQLIGH EFADGNKESA SWKEVLNSSK 480 TSSVVEPQET GLYTLDRSEK LSSSLTGPNG AFEYPSLSRP QEVDIFMSPF SSAIETHSDY 540 FTSFFEQGQM GNLESDISLT VAQTQKFTIR EISPEWGDAN EPTKVIVIGS FLCDPSESAW 600 TCMFGNVEVP AQIIQEGVIC CEAPPHLPGK VTLCITSGNR ESCSEVREFE YRVKSSRSTP 660 NNSPPKESSR SAEELLLLVR FAQILLSDSS VQKSDTVESE FVRKSKADDD TWGSIIEALL 720 VGSGSSSSTI YWLLEEFLKD KLEQWLSSRS QGLDQTDCSL SRKEQGMIHM VAGLGFEWAI 780 NPILNLGVNI NFRDINGWTA LHWAARFGRE KMVAVLVASG ASAGAVTDPS SQDPIGKTPA 840 SIAAIHGHKG LAGYLSEVAL TSHLSSLTLE ESEISRSCAE IEAEITVNSI SKSSLETYED 900 QAPLKNTLAA VRNAAQAAAR IQSAFRAHSF RRRQQKEGGV TLDDYGISSD DILGLSAMSK 960 LNFRNPRDYN SAALSIQKKY RGWKGRKDFL ALRKKVVKIQ AHVRGYQVRK HYKVICWAVG 1020 ILDKVVLRWR RKGVGLRGFR HEAESTESSE DEDILKVFRK QKVDGAIDEA VSRVLSMVES 1080 PEAREQYQRM LERYHQAKAE LGSTSGEAGA PISLEDFVKM EDIDMYQLQ

Sequence ? help Back to Top

Protein Sequence Length: 1129 aa Download sequence

MSKIPFWIFY RRFHRIDYTD QAAAHRLPPA NCVMPRRRMT RRRTLLRLGR AVTVGFVKPK  60
FKPGTVHCND VSGVIPVRRG CLGSPARARL AYNINDLFQE AQGRWLKPAE VLFILQNHEK  120
YKVTPEPPQQ PVRYNINDLF QEAQGRWLKP AEVLFILQNH EKYKVTPEPP QQPVSGSLFL  180
FNKRILRFFR RDGHRWRKKK DGRTVGEAHE RLKVGNVETL NCYYAHGEDN PNFQRRSYWM  240
LDPAYEHIVL VHYREISEVK PGTGSNIQSP VSSSTLSQSP ISNTTQHPGS VSMISELYEP  300
YTSPGSVEVS SDLVIKKNGR ESAENLYRTG ESDSSSKADV SQALRRLEEQ LSLNDDSFNE  360
FVDDNPDGSD TPEYPSDQFT AFHGQEHIVH DQFYSGHSLM QGNADNSSDI LDYHNDIVNQ  420
DQFTPFHGPE HIVNDQFYSG RAQMQSNVDL SGKHHQLIGH EFADGNKESA SWKEVLNSSK  480
TSSVVEPQET GLYTLDRSEK LSSSLTGPNG AFEYPSLSRP QEVDIFMSPF SSAIETHSDY  540
FTSFFEQGQM GNLESDISLT VAQTQKFTIR EISPEWGDAN EPTKVIVIGS FLCDPSESAW  600
TCMFGNVEVP AQIIQEGVIC CEAPPHLPGK VTLCITSGNR ESCSEVREFE YRVKSSRSTP  660
NNSPPKESSR SAEELLLLVR FAQILLSDSS VQKSDTVESE FVRKSKADDD TWGSIIEALL  720
VGSGSSSSTI YWLLEEFLKD KLEQWLSSRS QGLDQTDCSL SRKEQGMIHM VAGLGFEWAI  780
NPILNLGVNI NFRDINGWTA LHWAARFGRE KMVAVLVASG ASAGAVTDPS SQDPIGKTPA  840
SIAAIHGHKG LAGYLSEVAL TSHLSSLTLE ESEISRSCAE IEAEITVNSI SKSSLETYED  900
QAPLKNTLAA VRNAAQAAAR IQSAFRAHSF RRRQQKEGGV TLDDYGISSD DILGLSAMSK  960
LNFRNPRDYN SAALSIQKKY RGWKGRKDFL ALRKKVVKIQ AHVRGYQVRK HYKVICWAVG  1020
ILDKVVLRWR RKGVGLRGFR HEAESTESSE DEDILKVFRK QKVDGAIDEA VSRVLSMVES  1080
PEAREQYQRM LERYHQAKAE LGSTSGEAGA PISLEDFVKM EDIDMYQLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein