PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_ssc0000119.1_g000011.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 307aa    MW: 33082.8 Da    PI: 9.1838
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_ssc0000119.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.31.7e-1397141347
                                 SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
             Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                 +WT++E++l++ + ++ G+g+W+ I+r   k+Rt+ q+ s+ qky
  Rmu_ssc0000119.1_g000011.1  97 PWTEDEHKLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKY 141
                                 8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MSSGTCSTTV DPAAGAAKEF MLFGVRVVVD SMRKSVSLNN LSQYEHPTEA SNNNNNNSSG  60
AGAGAGKDDA VAGYVSENDV VHNSGGNRER ERKRGVPWTE DEHKLFLLGL QKVGKGDWRG  120
ISRNYVKTRT PTQVASHAQK YFLRRSNHNR RRRRSSLFDI TTDSVPATPM EEEQVHHQDN  180
TSHLHSLPPP PPQSESCNPN GFSMVPIFPM NVGPAVVQVA TKKPTGNLKL GQGNPGCPSP  240
KIVHPVALHS APHATEASDL NLNATIDTSP LALNLSLSMN SRESSSRHSA FQAMSSFGNG  300
DNIITVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.24e-55MYB_related family protein