PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000058.1_g000009.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 312aa MW: 34784.4 Da PI: 5.0781

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000058.1_g000009.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.5	3.2e-33	63	117	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Rmu_ssc0000058.1_g000009.1 63 KQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRL 117 79****************************************************8 PP
2	Myb_DNA-binding	58.7	1.3e-18	65	116	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++++++vda++qlGg+ t+k + r mg g+t +++ks++qky+ Rmu_ssc0000058.1_g000009.1 65 RLRWTSDLHDRFVDAITQLGGPdraTPKGVLRVMGvPGLTIYHVKSHLQKYR 116 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
LLRSSLVCSS AVNMYHAKKF STASLVPHKP QTSEQLASDS SVKNPTPCAS ASASASASAG 60 NGKQRLRWTS DLHDRFVDAI TQLGGPDRAT PKGVLRVMGV PGLTIYHVKS HLQKYRLAKY 120 LPESPADGSK DEKKGSGDSL SCSDSSPGVQ INEALRMQME VQKRLHEQLE ASKTAIYYFK 180 HERFRFDRFG QPYKQAFKSL PYWSSNDYDL YISSDPDFPP AQFVTVHEED DEDFDGEDDI 240 FSQYQSTIHA EQNRDDVVSE PNSISNTEDL SLDRENQVNF VMDLFQQCVE QSQVTARSVL 300 VSSDSDFGVV GF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	8e-51	G2-like family protein