PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000050.1_g000098.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 399aa MW: 44710 Da PI: 7.5547

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000050.1_g000098.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.7	1.1e-32	259	314	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ Rmu_ssc0000050.1_g000098.1 259 KQRRCWSPELHRRFVSALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 314 79****************************************************97 PP
2	Myb_DNA-binding	44.6	3.4e-14	261	312	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a +qlGg t+k I + m+ g+t ++ks++qky+ Rmu_ssc0000050.1_g000098.1 261 RRCWSPELHRRFVSALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 312 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MGSVPPELSL DFRPSFVPKT ITDFLKEVSL IGNVTERLSK LDDFVKRLEE EMRKIDAFKR 60 ELPLCMFLLN DAIQALKEDA MQCAKPNVQP VLEEFIPLKK DCDKNTGEPN NHKKEKDSRD 120 KKNWMSSVQL WNTDNNHHPP TSDFPCDRKQ GSEIDSKRNE TRNGIANGDP FQTCRDRNGG 180 RAFVPFKAYP AFPVTAVRKE DKEDLAVHGL SLLTPGIKNP KEESASSGSR STCGRAVSFS 240 AANVQSHMRI SPQQPTSRKQ RRCWSPELHR RFVSALQQLG GSQVATPKQI RELMQVDGLT 300 NDEVKSHLQK YRLHTRRVPA AKSAPANQSV VVLGDLWMSQ DQYDDSSKAN SSQSGSPQGP 360 LQLAENGGND EEDSDDDDDA KSESYSWKGH IHKPGKNDV

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MGSVPPELSL DFRPSFVPKT ITDFLKEVSL IGNVTERLSK LDDFVKRLEE EMRKIDAFKR  60
ELPLCMFLLN DAIQALKEDA MQCAKPNVQP VLEEFIPLKK DCDKNTGEPN NHKKEKDSRD  120
KKNWMSSVQL WNTDNNHHPP TSDFPCDRKQ GSEIDSKRNE TRNGIANGDP FQTCRDRNGG  180
RAFVPFKAYP AFPVTAVRKE DKEDLAVHGL SLLTPGIKNP KEESASSGSR STCGRAVSFS  240
AANVQSHMRI SPQQPTSRKQ RRCWSPELHR RFVSALQQLG GSQVATPKQI RELMQVDGLT  300
NDEVKSHLQK YRLHTRRVPA AKSAPANQSV VVLGDLWMSQ DQYDDSSKAN SSQSGSPQGP  360
LQLAENGGND EEDSDDDDDA KSESYSWKGH IHKPGKNDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	7e-60	G2-like family protein