PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_ssc0000018.1_g000074.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 482aa MW: 52474.7 Da PI: 6.4775

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_ssc0000018.1_g000074.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.7	1.1e-27	187	241	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQkYR++ Rmu_ssc0000018.1_g000074.1 187 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQKYRSH 241 5689***************.******************************86 PP
2	Myb_DNA-binding	39.3	1.5e-12	190	239	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ Rmu_ssc0000018.1_g000074.1 190 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQKYR 239 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MLIVSPLREQ HKDENRGGDQ MESFSIGANV VDFSEFSGGN LLDSIDFDDL FIGIDSEMDV 60 LPDLEMDSEM LAEFSVSAGE ESDFNTSPVS VEKWEEDNKA STAEEREDDH HQKVDSSGSG 120 TTEFKYSSSD NSTHGGCGGG EEIVSKRDEI AGAVNNNTSS SPKETTDKAR KSSSSSAQSK 180 SSHGKRKVKV DWTPELHRRF VQAVEQLGVD KAVPSRILEL MGIDCLTRHN IASHLQKYRS 240 HRKHLLAREA EAASWTQRRQ MYGSAAAAGG GGVGVKRPSS EMGPWLAPPT MGFPPPMTPM 300 HQHHHGHHPQ FRPLHVWGHP TVDQSMMHMW PPKHLAPFPS PQPPPSWPPA PPPPPDNSYW 360 HHHHQRVPAN AVLTPGTPCF PRQMTTTHTP PATRFPAPPV PGIPPHPGMY KLDPGGLGAP 420 GQSGPHPLVD FQPSKESIDA AIGDALSKPW LPLPLGLKPP STDSVMGELQ RQGIPKVPPS 480 CA

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MLIVSPLREQ HKDENRGGDQ MESFSIGANV VDFSEFSGGN LLDSIDFDDL FIGIDSEMDV  60
LPDLEMDSEM LAEFSVSAGE ESDFNTSPVS VEKWEEDNKA STAEEREDDH HQKVDSSGSG  120
TTEFKYSSSD NSTHGGCGGG EEIVSKRDEI AGAVNNNTSS SPKETTDKAR KSSSSSAQSK  180
SSHGKRKVKV DWTPELHRRF VQAVEQLGVD KAVPSRILEL MGIDCLTRHN IASHLQKYRS  240
HRKHLLAREA EAASWTQRRQ MYGSAAAAGG GGVGVKRPSS EMGPWLAPPT MGFPPPMTPM  300
HQHHHGHHPQ FRPLHVWGHP TVDQSMMHMW PPKHLAPFPS PQPPPSWPPA PPPPPDNSYW  360
HHHHQRVPAN AVLTPGTPCF PRQMTTTHTP PATRFPAPPV PGIPPHPGMY KLDPGGLGAP  420
GQSGPHPLVD FQPSKESIDA AIGDALSKPW LPLPLGLKPP STDSVMGELQ RQGIPKVPPS  480
CA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	7e-70	G2-like family protein