PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0042306.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | HSF | ||||||||
Protein Properties | Length: 104aa MW: 11925.3 Da PI: 5.1297 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 105 | 6.2e-33 | 26 | 104 | 2 | 89 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k+ye+++d+e ++liswse g++f+v+ + efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ Rmu_sc0042306.1_g000001.1 26 FLTKTYELVDDPEADDLISWSEGGSTFIVWRPAEFARDILPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFANDC 100 9****************************************************************999.........******* PP XXXX CS HSF_DNA-bind 86 Fkkg 89 Fk+g Rmu_sc0042306.1_g000001.1 101 FKRG 104 *996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 104 aa Download sequence |
MAALPDQNGD SASGGRESQR TIPTPFLTKT YELVDDPEAD DLISWSEGGS TFIVWRPAEF 60 ARDILPKYFK HNNFSSFVRQ LNTYGFRKVV PDRWEFANDC FKRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11660.1 | 6e-55 | HSF family protein |