PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0036999.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 257aa MW: 29652 Da PI: 9.8095 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.6 | 1.7e-16 | 10 | 102 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 ffk+ + ++++ l++p kf +++ +++ e+ tl l+ s sW+v++ ++ + +++++GW++F k+n L + +f+vF Rmu_sc0036999.1_g000001.1 10 FFKII--KTGFNTDDLRIPPKFRRHMlnELS--ETATLELKGYSKGSWTVQV--SQIESDIYFKNGWQKFIKDNSLGDFEFLVF 87 67777..77889999*******866665444..6679999************..888889************************ PP EE-SSSEE..EEEEE-S CS B3 83 kldgrsefelvvkvfrk 99 ++++ + f ++ +f+k Rmu_sc0036999.1_g000001.1 88 RYERPMHF--TIEIFDK 102 **988999..9999987 PP | |||||||
2 | B3 | 47.7 | 2.8e-15 | 179 | 255 | 15 | 97 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 ++ +p +f +eh +++ ++l++++g++W+vk+ +++++ l++GW eF +an+++ gD+++F l+g ++++vv+v+ Rmu_sc0036999.1_g000001.1 179 NVAVPVDFSREHL--PQGYYNIVLKNLKGQKWKVKV--VCSGKTVKLSAGWVEFRRANQINCGDICTFDLVG--RRTMVVHVI 255 5789999*99994..235678***************..77777799***********************998..455688886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MEGASKEPTF FKIIKTGFNT DDLRIPPKFR RHMLNELSET ATLELKGYSK GSWTVQVSQI 60 ESDIYFKNGW QKFIKDNSLG DFEFLVFRYE RPMHFTIEIF DKTACKRNNL LEKSTRADNT 120 KRPRGRPRKC NRSAAGENIQ SCQSFELKEI KEEEEEEAAT LPSSGFRSFT SIMGKHCYNV 180 AVPVDFSREH LPQGYYNIVL KNLKGQKWKV KVVCSGKTVK LSAGWVEFRR ANQINCGDIC 240 TFDLVGRRTM VVHVIPK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 129 | KRPRGRPRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24645.1 | 1e-16 | B3 family protein |