PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0035522.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 261aa    MW: 30190.8 Da    PI: 9.2589
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0035522.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.21.1e-11138228183
                                EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--. CS
                         B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk. 75 
                                f+k+lt sdv    +rl ++k+ +++        +++ ++++++t +d++g+++ + ++++  +  +vlt+GWk F+++++L  
  Rmu_sc0035522.1_g000001.1 138 FEKQLTFSDVKDDqSRLAMSKEDVQKRlmpllneNEDLRRGIQVTTYDLDGKEYPMVFKIWVEK-IHVLTGGWKAFCHDHKLVe 220
                                89********988799********9999**998744555999****************999997.689*************985 PP

                                TT-EEEEE CS
                         B3  76 egDfvvFk 83 
                                  Dfv+  
  Rmu_sc0035522.1_g000001.1 221 KQDFVTVW 228
                                77888865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MARLTNEEDD DMMKAVFNLC HMKHVLVDST KDIQILEDTN RKCLSQISAK DKRKTLLIKE  60
QGGECIVNVA QGLHRNQRLQ QDPKRKALQV TGQEAIYAGQ GLANSNVCQG LFYGNYAPPN  120
LPPVPRLRQF IEICSQPFEK QLTFSDVKDD QSRLAMSKED VQKRLMPLLN ENEDLRRGIQ  180
VTTYDLDGKE YPMVFKIWVE KIHVLTGGWK AFCHDHKLVE KQDFVTVWMF RNAATGSLCF  240
VIDSRRLPVL ETIKRRRTRR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.17e-28B3 family protein