PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0035188.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 748aa MW: 86233.9 Da PI: 7.9457 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 64.6 | 2.7e-20 | 36 | 118 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 fY++YAke GF+v+ +s+k+ ng i+++ +vCsk+g+++ + kk r+r+ tr++Cka+++v ++ gk++vt +++ Rmu_sc0035188.1_g000002.1 36 FYKSYAKESGFDVKSFTSEKK--NGVIVRKAYVCSKQGTSKVTGKK-----RNRNRTRVNCKARIVVVRRAtIGKYVVTIFDEG 112 *************99998887..9****************998888.....999***********99888889*********** PP FAR1 85 HnHela 90 H+H+l+ Rmu_sc0035188.1_g000002.1 113 HSHPLT 118 ****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 748 aa Download sequence |
LQQSFDDTAI YCPQVKVDLI PVKNQEFHTL EDVETFYKSY AKESGFDVKS FTSEKKNGVI 60 VRKAYVCSKQ GTSKVTGKKR NRNRTRVNCK ARIVVVRRAT IGKYVVTIFD EGHSHPLTTP 120 RRKHLTKIHR EVSSIHKSLT KQLTAVNVPT CTQFDFLGVH SGGVENIGCL QQDIYNYKRD 180 CRKEVKGHDG DMLHEYFLLE KEKDPSLIFK IEADNENRIT HIFWADAISR RSYKFYGDVV 240 IFDTTYNTNM YSLIFAPLVG VNNHGQTIIL ACAFLSNETT DSFVWFFKEF LDAMPGDAPR 300 MIITDQDPAM TKAISEVLPQ TFHRYCSWHI LNKFSEKIDP GKYTRYYDEF QDCIWNSENR 360 DEFDARWTSI VVSSGLGDNG WLKTMYDIRS TWVPAYVNHI FSAGMSSSQR AESGHAFYKR 420 FVSKENTLLD FMVQFNRAVT RQRHMELMED HVDINEKPNF HSPFEMADQM ARVYTHECFK 480 QFYDQLSQCC NYRFELSHEN DTYMVYIALR KKMENPKGRE IIYAKESDFV SCSCKKFETV 540 GIPCRHILAF LIFIRLVDRL PDQYILKRWT KSRKAETVLD DVGVEITDNG DLLARRSRLC 600 QYAVDVIDKI MGSEEASDLF VDSLKSVLEM YNSMMADGET VKSAIVPAEQ KSLPSQHIYN 660 EPIQVRAKGC GKRLKAGKEK GRLKAAKKAN GKGRFCHGCK KNDQQHDKRN CPELKNKNDI 720 SIPQTGEDTS DPSTDEEEYS NTGVDEFA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 79 | 84 | KRNRNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-102 | FAR1 family protein |