PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0034955.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | G2-like | ||||||||
Protein Properties | Length: 196aa MW: 22485.2 Da PI: 11.0564 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 28.2 | 4.1e-09 | 11 | 60 | 4 | 50 |
G2-like 4 lrWtpeLHerFveaveqLGGsek.AtPktil.elm.kvkgLtlehvkSHL 50 ++Wt e H+ Fv v +LGG +k tP+ ++ e+m +vkgL+ + H+ Rmu_sc0034955.1_g000003.1 11 MEWTLEHHKTFVGIVIRLGGFNKiGTPRIVVaEMMnNVKGLSQRTLVQHM 60 89******************98857***8762566569****99998886 PP | |||||||
2 | G2-like | 43.7 | 6e-14 | 110 | 161 | 5 | 53 |
G2-like 5 rWtpeLHerFveaveqLGGsekAtPktilelmkv...kgLtlehvkSHLQkY 53 Wt e H+r veav++LGG kAtP +l+lm+ +gLt+ ++ HL Rmu_sc0034955.1_g000003.1 110 SWTVEHHKRVVEAVTKLGGLSKATPTVVLRLMDEerrQGLTVRTLRLHLSGL 161 6*******************************9633369*********9755 PP | |||||||
3 | Myb_DNA-binding | 25 | 4.3e-08 | 110 | 158 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT....TTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg....kgRtlkqcksrw 44 +WT e +++ v+av++lGg t++ + r m +g+t +++++ Rmu_sc0034955.1_g000003.1 110 SWTVEHHKRVVEAVTKLGGLskaTPTVVLRLMDeerrQGLTVRTLRLHL 158 7*****************88**************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MDVDGDGQEP MEWTLEHHKT FVGIVIRLGG FNKIGTPRIV VAEMMNNVKG LSQRTLVQHM 60 VWFQIINKRT HLSLDLRTRP PLQPCSDSYQ SLVSHFEGLH VAPPKRLLSS WTVEHHKRVV 120 EAVTKLGGLS KATPTVVLRL MDEERRQGLT VRTLRLHLSG LRYLQKKTQK SIHECSQGKA 180 LRNRKVSTKF KNFVQH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45580.1 | 3e-09 | G2-like family protein |