PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0032116.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 442aa    MW: 50087.9 Da    PI: 4.267
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0032116.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.46.9e-20151492128
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.......eekewyfFskrdkkyatgkrknr 76 
                                 pG rF P ++elv +yLk+ ++g+k++  +  + ++d+y + ePw++  ++k+        +k++yf ++++k ++t+kr +r
  Rmu_sc0032116.1_g000002.1  15 LPGERFCPMEDELVLFYLKPMLSGQKVPGRNLvVFDCDLYGHqEPWEIWDAYKTrrpndlrLNKDIYFLTQHKKMSSTDKRVRR 98 
                                589***********************99877669999***8879****742222223333334588****************** PP

                        NAM  77 atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                a+ +g+Wk   + k+v+s  +g +vglkk +++   ++ + ++  W++ e+ l
  Rmu_sc0032116.1_g000002.1  99 AVGNGTWKGDDSGKPVKSLeTGCVVGLKKRFTYK--NEASVHNGCWILYEFYL 149
                                ********9999999988657889********98..44555699******976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MQQEFAMEES RGNQLPGERF CPMEDELVLF YLKPMLSGQK VPGRNLVVFD CDLYGHQEPW  60
EIWDAYKTRR PNDLRLNKDI YFLTQHKKMS STDKRVRRAV GNGTWKGDDS GKPVKSLETG  120
CVVGLKKRFT YKNEASVHNG CWILYEFYLD RSLRDKKQKV KDYVLCLLRK NGEPQTKIEK  180
KRKQREEEEV LEHNYAYDDG ENYREQEEFL EPQAKRQQIV PSIDNIATVP MPSEDDAFAA  240
EVEGLLPCSE DDNVPSRAEA IGFQGEENGE VQQLASEVQS CPSFGDYHGI FNPLPEEDFL  300
LEEMVEEMGM VEMEDLLVVN GANSNMDVAE ENVLNSTLLH TPTSSMSAAY DGTDMPYLSM  360
KNGCTDPAGS NNICGGSIGF QGGAYWPESL VEVPTEEKQK TADGDCSDWL DSISFSPEEN  420
NFLWSEVQWC SQLTLACNAL IA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.28e-14NAC family protein