PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0028578.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 161aa    MW: 18173.1 Da    PI: 9.7741
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0028578.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-174090255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               +y+G+r+++ +g+++AeIrdp+ ng   r +lg+f+tae+Aa+a+++a+  ++g
  Rmu_sc0028578.1_g000001.1 40 RYRGIRRRP-WGKYAAEIRDPTRNG--VRRWLGTFDTAEQAARAYDRAAFGFRG 90
                               59*******.**********98887..**********************88776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MHVTTHILPP NLNSNRSNPA TSIMEGKREQ SKPKVRDQIR YRGIRRRPWG KYAAEIRDPT  60
RNGVRRWLGT FDTAEQAARA YDRAAFGFRG RLAILNFPNE SQYHNSSTSS FVTSTSPPSS  120
SSFSSAAANI EKNFGNEESG VIEFEYLDNM ILEELLATQE S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.13e-22ERF family protein