PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0027733.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bHLH

Protein Properties

Length: 318aa MW: 34509 Da PI: 8.4738

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0027733.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	53.6	3.9e-17	127	173	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq Rmu_sc0027733.1_g000001.1 127 VHNLSERRRRDRINEKMKALQELIPHS-----NKTDKASMLDEAIEYLKSLQ 173 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MMTVGSSYSG SNQVPNDFDV SRASSNGDGT TGFSTGPLYN NVQKMMPLSE GGMTETLDPT 60 LTSSSGGSGS SFGRGGKQSN VVNSNKRKGR DAEDSECQSE AAEIESAAGN KPAQRSGSSR 120 RTRAAEVHNL SERRRRDRIN EKMKALQELI PHSNKTDKAS MLDEAIEYLK SLQLQLQVMW 180 MGGGMAPMMF PGVQHYMSRM GMGMGPPAMP SMHNLMQLPR VPLVDQCMTV TPPTNQAVMC 240 QTPVLNPVDY HNQMQNPSIQ EQYARLMGFH HMQTMSQPMN MFRFGSQPLP QSQMMAPTGM 300 NTGPLSGGAA TNDALSGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	137	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	3e-40	bHLH family protein