PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0026606.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 151aa    MW: 17431.6 Da    PI: 10.1038
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0026606.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.93.1e-2724110191
                       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 
                                ++Y++YAk+vGF + k +s++s+ ++e+++++f C ++g++++++++     ++r++ ++gCka+++vk++ +g+w+v+++++e
  Rmu_sc0026606.1_g000001.1  24 DYYKAYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRPNGNWYVYSFVKE 103
                                69***************************************999877....9******************************** PP

                       FAR1  85 HnHelap 91 
                                HnHel p
  Rmu_sc0026606.1_g000001.1 104 HNHELLP 110
                                ****975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MEAISIVEEP HDAMEFESHE AAYDYYKAYA KSVGFGTAKL SSRRSRASKE FIDAKFSCIR  60
YGNKQQSDDA INPRPSPKIG CKASMHVKRR PNGNWYVYSF VKEHNHELLP AQAHFFRSHR  120
NADPLKNNDV RMRRRKNVNS VSSLFSAYQN V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.17e-61FAR1 family protein