PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0026563.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 179aa MW: 19943.5 Da PI: 10.5516 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 50.7 | 3.1e-16 | 7 | 68 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++ +++L++l+++ r p+ae+++++ +l +++ +++++WF N++a+e++ Rmu_sc0026563.1_g000004.1 7 STRWTPTTDHIRILNKLYYNkgVRSPTAEQIQRICLQLklyrKIESKNIFYWFRNHKARERQ 68 58****************97789*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 92.8 | 3e-30 | 6 | 70 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++ i+iL++ly+ +G+r+P++e+iqri +L+ y kie+kN+fyWF N+kaRerqk+ Rmu_sc0026563.1_g000004.1 6 SSTRWTPTTDHIRILNKLYYnKGVRSPTAEQIQRICLQLKLYRKIESKNIFYWFRNHKARERQKK 70 689***************9779*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MLCRRSSTRW TPTTDHIRIL NKLYYNKGVR SPTAEQIQRI CLQLKLYRKI ESKNIFYWFR 60 NHKARERQKK RLTSDVHVPM QRSGLVGNGN GTNWKPEDQY IKFGSSASAI ASASSADVIA 120 VNGQMGNYGG YGSMNMEKSF RDCSISAGGG TSSTGVGRSI SHNFGSWVGC RVDPYSSSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 7e-31 | WOX family protein |