PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0022527.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 154aa    MW: 17661.2 Da    PI: 10.1555
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0022527.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR195.27.9e-3051138290
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 
                                fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vk+ek+gkw vt++ ++H
  Rmu_sc0022527.1_g000001.1  51 FYDAYATQLGFIMRVDAFRRSLRDGKVVWRRLVCNKEGFRKTRPKR-SENRKPRAITREGCKAMIVVKREKSGKWIVTRFIKDH 133
                                9*******************************************99.9************************************ PP

                       FAR1  86 nHela 90 
                                nH+l+
  Rmu_sc0022527.1_g000001.1 134 NHSLV 138
                                **996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
LPTMDEQPST SKDEDMIESS NGKEAATFEG SSDMEPYVGM EFETEEAAKV FYDAYATQLG  60
FIMRVDAFRR SLRDGKVVWR RLVCNKEGFR KTRPKRSENR KPRAITREGC KAMIVVKREK  120
SGKWIVTRFI KDHNHSLVVT PANGRRTVIL SQTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.11e-62FAR1 family protein