PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0022203.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 360aa MW: 40060 Da PI: 7.34 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 58.4 | 1.3e-18 | 20 | 108 | 3 | 99 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 kv+ ps+v+ +l+lpkkf+ +h + +++++++ledesgr+++ k+ ++ + l++GW++F a++L +gD+vvF+++ Rmu_sc0022203.1_g000003.1 20 KVMRPSNVTGCFCLSLPKKFCGDHL-P-KQDTMIVLEDESGREFQTKY--LVGKAG--LSAGWRGFSIAHKLLAGDVVVFQRVT 97 8999*****************9995.3.37789***************..555444..9**********************766 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 s+f +v ++r+ Rmu_sc0022203.1_g000003.1 98 PSKF--KVYIVRS 108 5666..8888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence |
MDRAKKLEAN LAPEFPRVAK VMRPSNVTGC FCLSLPKKFC GDHLPKQDTM IVLEDESGRE 60 FQTKYLVGKA GLSAGWRGFS IAHKLLAGDV VVFQRVTPSK FKVYIVRSSG LDVADCALGL 120 VKLDAGIRQM DTANFTARET AKVSIPREPI QKKNTIACNT SLAQMSDRSG NDGEDFGSEV 180 LDGIRLAESV IPFKEVKGME NFDVIINGLV LNSEFSKYHL TKYYELCCSQ SSFLHKNILE 240 GLNFKLVAGI ISETINISDA IRACKITTSE CDFLTWDKTL QASETLGMNV GFLRTRLNKL 300 ASLASESKRY SNLEGGRAEA EVKLLGEKEN TTWFDSEIET HNLLFERLKA MFEEVARAPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 8e-31 | B3 family protein |