PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0021999.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 365aa MW: 39886 Da PI: 6.5626

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0021999.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.2	4.6e-10	164	212	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l + Rmu_sc0021999.1_g000001.1 164 KRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQ 212 9****************************************99887655 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MLGSTTSPVP NNNNHPFIRS TAAATGGTPH HHSSGTSINH RRAHSEVSFR LPEDLMDLSG 60 PDPFNGAGSS TDDLGSEEDL FSTYIDLDKL QAGAADDNGP DDNKGPNGPN EDNGGVGEKR 120 QSRHRHSSSV DASSTSTGVF GEVMEAKKAM PPDKLAELWN LDPKRAKRIL ANRQSAARSK 180 ERKARYIQEL ERKVQTLQTE ATTLSAQLTL FQRDTTGLST ENTELKLRLQ AMEQQAQLRD 240 SLNEALKKEV ERLKVATGEM MSHSESFNLG MHQMPYNNNP SAYFPITQQQ PGPAGHQNMQ 300 LPPFNHSQSS MPSHHLHQPN SHTLSDIMQN GPVGQLQGLD ISNKMPHLVK SEGPSLSASE 360 SSTTF

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MLGSTTSPVP NNNNHPFIRS TAAATGGTPH HHSSGTSINH RRAHSEVSFR LPEDLMDLSG  60
PDPFNGAGSS TDDLGSEEDL FSTYIDLDKL QAGAADDNGP DDNKGPNGPN EDNGGVGEKR  120
QSRHRHSSSV DASSTSTGVF GEVMEAKKAM PPDKLAELWN LDPKRAKRIL ANRQSAARSK  180
ERKARYIQEL ERKVQTLQTE ATTLSAQLTL FQRDTTGLST ENTELKLRLQ AMEQQAQLRD  240
SLNEALKKEV ERLKVATGEM MSHSESFNLG MHQMPYNNNP SAYFPITQQQ PGPAGHQNMQ  300
LPPFNHSQSS MPSHHLHQPN SHTLSDIMQN GPVGQLQGLD ISNKMPHLVK SEGPSLSASE  360
SSTTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40620.1	1e-85	bZIP family protein