PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0021850.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | GATA | ||||||||
Protein Properties | Length: 92aa MW: 10447 Da PI: 10.8028 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 44.9 | 1.6e-14 | 41 | 76 | 1 | 34 |
GATA 1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C+ nC++++Tp+WRrgp +ktL naCG++yrk + Rmu_sc0021850.1_g000001.1 41 CTnfNCRVSETPMWRRGPLESKTLWNACGIKYRKLK 76 55559****************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 92 aa Download sequence |
MRKFCVINVS HNKAKVGGSR KKKTTRCQRP APETDDQNRT CTNFNCRVSE TPMWRRGPLE 60 SKTLWNACGI KYRKLKLKEE QGEGTSGKGS SN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20750.1 | 2e-12 | GATA family protein |