PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0021673.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 355aa MW: 40896.9 Da PI: 4.6306 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 81.9 | 1.3e-25 | 7 | 80 | 55 | 128 |
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 e ewyfFs+rd++y++g+r+nr++k gyWkat +d+ +++++ge++g k L fy+g++ +g+kt+W mheyr+ Rmu_sc0021673.1_g000001.1 7 EIEWYFFSSRDRRYPNGSRPNRSAKGGYWKATKRDEIITAQGGEEIGFKMHLEFYEGTHAQGRKTNWKMHEYRI 80 459*********************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MYPRIREIEW YFFSSRDRRY PNGSRPNRSA KGGYWKATKR DEIITAQGGE EIGFKMHLEF 60 YEGTHAQGRK TNWKMHEYRI KEENEENDIG PPQNTNKGEG ISMRLDDWVL CKIYIKKNFK 120 VDTDSNSLKT SDNSDQVVLP VTNVTTSRDC QNKLAIQHEV QDQSLNASQF DHNGFSTLTN 180 YRDVESSSSN FWNQNYTDDY DTYLMQMSRD PLSSRFFSSP FPLQSSTDQI CTELEPVDDK 240 ISEVDPSSML PAHVRECDEN MSENKNQNYT DDYDTYLMQM SRDPSSSRLF SSPFPLQSST 300 DQICAGLEPV DDKISQVDPS SIVLPAHVRE YDNRACKAEP IQPAVRDEGD DHVSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.1 | 1e-34 | NAC family protein |