PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0021182.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family BES1
Protein Properties Length: 315aa    MW: 34459.5 Da    PI: 9.692
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0021182.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822203.18.5e-63111442138
                     DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagss 85 
                                + +rkp+w+ErEnn+rRERrRRaiaaki++GLRaqG ++lpk++DnneVlkALc eAGw+ve+DGttyrkg+kp+  +++ g+s
  Rmu_sc0021182.1_g000002.1  11 TVRRKPSWRERENNRRRERRRRAIAAKIFTGLRAQGSFNLPKHCDNNEVLKALCVEAGWTVEEDGTTYRKGFKPP-PTDTPGTS 93 
                                568************************************************************************.9******* PP

                     DUF822  86 asaspesslqsslkssalaspvesysaspksssfpspssldsislasaasllp 138
                                ++++p ssl+ s+ ss+++sp++sy+asp+sssfpsps+    +++  ++l+p
  Rmu_sc0021182.1_g000002.1  94 TKVTPYSSLNPSPLSSSFPSPIPSYQASPSSSSFPSPSRCFDGTNS--SNLFP 144
                                **************************************95433333..44444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MTSDGATSAS TVRRKPSWRE RENNRRRERR RRAIAAKIFT GLRAQGSFNL PKHCDNNEVL  60
KALCVEAGWT VEEDGTTYRK GFKPPPTDTP GTSTKVTPYS SLNPSPLSSS FPSPIPSYQA  120
SPSSSSFPSP SRCFDGTNSS NLFPNLRSAI PSSLPPLRIS NSAPVTPPLS SPSSRKCQPI  180
PNWDSIAKQS MASFNYPFYA VSAPASPTRH QHQLHTPPTI FECDESDTST VESGQWMNFQ  240
KFATALSARP TSPTFNLVKP VTAQQNLPAN GMAEMGRGSE FEFLGEQVKP WVGERIHEVG  300
LDDLELTLGN GKARS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11332RRKPSWRERENNRRRERRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-117BES1 family protein