PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0020600.1_g000008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 435aa MW: 49396.7 Da PI: 4.1756 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 66.4 | 8e-21 | 15 | 149 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.......eekewyfFskrdkkyatgkrknr 76 pG rF P d+elv +yLk+ ++g++++ + + ++d+y ePw++ +++k+ +k++yfF++++k ++t+kr +r Rmu_sc0020600.1_g000008.1 15 LPGQRFCPMDDELVLFYLKPMLSGQNVPGRNRvVFDCDLYGQqEPWEIWETFKTrrphdlrLNKDIYFFTQHKKMSSTDKRVRR 98 59************************8775544999**996549****753333234333334588****************** PP NAM 77 atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + sg+Wk + k+v +g +vglkk ++ + + + ++ W++ e+ l Rmu_sc0020600.1_g000008.1 99 NVGSGTWKGDDSGKPVRYVdSGCVVGLKKRYTYKN--EDSVHNGCWILYEFYL 149 ********9988888877657889********984..4555699******976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 435 aa Download sequence |
MQQEFLMEES RGNQLPGQRF CPMDDELVLF YLKPMLSGQN VPGRNRVVFD CDLYGQQEPW 60 EIWETFKTRR PHDLRLNKDI YFFTQHKKMS STDKRVRRNV GSGTWKGDDS GKPVRYVDSG 120 CVVGLKKRYT YKNEDSVHNG CWILYEFYLD RSLRDKKQKV KDCVLCLLRK NGEPKTKIEK 180 KRKQREEEQF LENNYACDDG ENSNREQEVS LEPQAKRQRT VPSIDNAPPT MPSEDDAALI 240 AAELEESLEC SEDDNAPSSE AEAVGLQGEE NGGLQKLASE GQSSGPSFVD YYGIFNPLPE 300 EDFLWEEMVE EMGTVEKEEP VLNGVSSNID VAEDNAVNST LLYAPTSSMS VASDGCTDMP 360 YLSENCCIDP SGSNNVCGGS IGLQDAAYWL ESLVEVPTDE QQKTADEDCS DWLESMINFS 420 PEENNFLWSE MQWCS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 174 | 183 | PKTKIEKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 5e-14 | NAC family protein |