PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0020337.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NF-YB
Protein Properties Length: 141aa    MW: 15703.1 Da    PI: 8.379
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0020337.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB59.11.1e-1872140371
                      NF-YB   3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwal 71 
                                ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +++se+++ c re+++ti+++ +l al
  Rmu_sc0020337.1_g000001.1  72 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLISSESNEVCSREEKRTIAPEHVLKAL 140
                                6899*************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
LLARSACLIL KNQSTPPSSD KSVYQPCPSC NSDRQSVQIR RVPLSDSRPP VPRSNSVTRS  60
RMEPMDIVGK SKEDASLPKA TMTKIIKEML PPDVRVARDA QDLLIECCVE FINLISSESN  120
EVCSREEKRT IAPEHVLKAL Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08190.25e-52NF-YB family protein