PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0020270.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 282aa    MW: 32623.9 Da    PI: 5.2452
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0020270.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.58.6e-2678055128
                        NAM  55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                e ewyfFs+rd++y++g+r+nr++k gyWkat +d+ +++++ge++g k  L fy+g++ +g+kt+W mheyr+
  Rmu_sc0020270.1_g000003.1   7 EIEWYFFSSRDRRYPNGSRPNRSAKGGYWKATKRDEIITAQGGEEIGFKMHLEFYEGTHAQGRKTNWKMHEYRI 80 
                                459*********************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MYPRIREIEW YFFSSRDRRY PNGSRPNRSA KGGYWKATKR DEIITAQGGE EIGFKMHLEF  60
YEGTHAQGRK TNWKMHEYRI KEENEENDIG PPQNTNKGEG ISMRLDDWVL CKIYIKKNFK  120
VDTDSNSLKT SDNSDQVVLP VTNVTTSRDC QNKLAIQHEV QDQSLNASQF DHNGFSTLTN  180
YRDVESSSSN FWNQNYTDDY DTYLMQMSRD PLSSRFFSYP FPLQSSTDQI CAGLEPVDDK  240
ISQVDPSSIV LPAHVREYDN RACKAEPIQP AVRDEGDDHV SK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.15e-35NAC family protein