PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0018349.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family EIL
Protein Properties Length: 607aa    MW: 67973.4 Da    PI: 5.4505
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0018349.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3436.23.1e-133373781322
                                XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                       EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84 
                                eel++rmwkd+++lkr+ke++kq++e+++a ++  k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv
  Rmu_sc0018349.1_g000004.1  37 EELERRMWKDRIKLKRIKEKEKQKIEAQQA-AERLKPKQTTDQARRKKMSRAQDGILKYMLKLMEVCQARGFVYGIIPEKGKPV 119
                                8************************99998.89999************************************************ PP

                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT-- CS
                       EIN3  85 egasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgv 168
                                +gasd++raWWkekv+fd+ngpaai ky+a+ l++++++++  ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plek+v
  Rmu_sc0018349.1_g000004.1 120 SGASDNIRAWWKEKVKFDKNGPAAIDKYEAEILAMTDADNN--RNGNSQTILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKAV 201
                                *******************************9999998888..7899************************************* PP

                                HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTT CS
                       EIN3 169 epPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnq 252
                                +pPWWPtG+e+ww + gl+  q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++
  Rmu_sc0018349.1_g000004.1 202 PPPWWPTGNEDWWMKSGLPCGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSR 284
                                **********************9.9*********************************************************** PP

                                TTT-S--XXXXXX........XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.........................X CS
                       EIN3 253 eekecatvsahss........slrkqspkvtlsceqkedvegkkeskikhvqavktta.........................g 303
                                ee+++++ s+++            +++++ t+s+++++dv+g++++ i + +  ++ +                         +
  Rmu_sc0018349.1_g000004.1 285 EEALIRQPSSDNGtsgitempRRGRGEKHATASSNSDYDVDGTDKELIDAGSVSSKDDrrtelmdvepssnlrsgtptnhvqdK 368
                                ***********444567775433449999************8888887643333333356789999999999995554444432 PP

                                XXXXXXXXXXXXXXXXXXX CS
                       EIN3 304 fpvvrkrkkkpsesakvss 322
                                         +++e++   +
  Rmu_sc0018349.1_g000004.1 369 ---------ERGEKRRKRK 378
                                .........4433333222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    
MGDLGEVGPE ISSDIEEDLR CDNLVEKDVS DEEIDPEELE RRMWKDRIKL KRIKEKEKQK  60
IEAQQAAERL KPKQTTDQAR RKKMSRAQDG ILKYMLKLME VCQARGFVYG IIPEKGKPVS  120
GASDNIRAWW KEKVKFDKNG PAAIDKYEAE ILAMTDADNN RNGNSQTILQ DLQDATLGSL  180
LSSLMQHCDP PQRKYPLEKA VPPPWWPTGN EDWWMKSGLP CGQSPPYKKP HDLKKMWKVG  240
VLTAVIKHMS PDIAKIRRHV RQSKCLQDKM TAKESAIWLG VLSREEALIR QPSSDNGTSG  300
ITEMPRRGRG EKHATASSNS DYDVDGTDKE LIDAGSVSSK DDRRTELMDV EPSSNLRSGT  360
PTNHVQDKER GEKRRKRKRA PVRPSSDDKL PAPSHNEPLH VEPLNALPDI NHTDAQMIGF  420
PIHENQQENV SVTTLRPPEQ DLDVQALPAS EFNYYADVPP DGVTATTQGM HVGGTPLLYH  480
GMQSAEMHHG NMYNLYNPSA EHVPGHDRQL SQIGMNELQI GPADVVPLQT IRNGNEITGG  540
DMPFYAKDPF QSEQDRTVDA NFGSPIDSLS LDYGGLFNSP FRLDLGIEGT GSLDDLNVDE  600
MMAYFAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1373379KRRKRKR
2374379RRKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-180EIL family protein