PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0017585.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 694aa    MW: 79608.7 Da    PI: 8.5275
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0017585.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.31.2e-124791798
                               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                         B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                               +lp kf++++g  ke s   +l+ ++gr+W+v l  ++ ++r+++ k W+ F++   L+ gDf+ F+++g+s+f  +v +f+
  Rmu_sc0017585.1_g000001.1  4 RLPPKFVTKFG--KELSDVAILTVPTGRVWQVGL--ERVDKRIWFVKDWQAFAEYYSLRYGDFLEFRYEGNSNF--RVLIFD 79
                               69*****9998..45888899999**********..**********************************9999..888886 PP
2B349.11.1e-15233328198
                                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                                ff++ +++ +++ + l +p +fae++ +   +s  ++l+ ++g++W+v++ ++ +++  ++ +G  +F  +n+L+egD+++F+l
  Rmu_sc0017585.1_g000001.1 233 FFSIILQPFNFTYCYLHVPTDFAEKYLSG--CSESIKLQGSHGKQWDVRF-VSTNPSLPIICRGCIQFLTDNNLEEGDVCLFEL 313
                                77888899999***************544..7778***************.566666788999********************* PP

                                -SS.SEE..EEEEE- CS
                         B3  85 dgr.sefelvvkvfr 98 
                                +++  +  l+v+++r
  Rmu_sc0017585.1_g000001.1 314 MKSkADVVLKVSILR 328
                                987788888888877 PP
3B349.86.2e-164155011299
                                HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                         B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                                ++  l +p +fa+++ ++  +   ++l+d++g +W+v+++ ++ s++   +++G + F  +++L++gD+++F+l++r++  l+v
  Rmu_sc0017585.1_g000001.1 415 NNYHLLIPVPFARRYLSS--GAEFIKLQDSNGGQWDVQCSSTNASSSvLRFGRGYNVFLTDKNLEQGDVCLFELIKRNDVLLKV 496
                                455699*********444..3336***************997766665999************************998887888 PP

                                EEE-S CS
                         B3  95 kvfrk 99 
                                +++r+
  Rmu_sc0017585.1_g000001.1 497 SALRA 501
                                88876 PP
4B351.41.9e-166056891199
                                HHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                         B3  11 lksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                                + ++ lv+p +f ++h g++  +++ +tle ++g++  v++iy   +++  +++GW+ F ++n+L+egD++vF+l+ +++  l+
  Rmu_sc0017585.1_g000001.1 605 H-KSFLVVPAEFDTKHlGYE--CPIFITLEAPNGKRCHVRCIYATDRKK--ISGGWSAFFSENNLEEGDVCVFELIASKDVVLK 683
                                3.4459******99996655..999****************99666666..99***********************99999888 PP

                                EEEE-S CS
                         B3  94 vkvfrk 99 
                                 ++fr+
  Rmu_sc0017585.1_g000001.1 684 ASIFRA 689
                                888885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    
MLQRLPPKFV TKFGKELSDV AILTVPTGRV WQVGLERVDK RIWFVKDWQA FAEYYSLRYG  60
DFLEFRYEGN SNFRVLIFDM TCSEIAYPRQ EQSSDLHSMG IHEEDMENDG VCDTLGTTTP  120
LSHASMKRKC KCLDKHVLER RHVLHSGSNL NKSIKRGVTS KENMLYQSDN ETRRKKTRYV  180
DEGDTINSSS VTKSAPASLK ENRMPSSLEL LTKQNDDKKV IQATRMFKLK NPFFSIILQP  240
FNFTYCYLHV PTDFAEKYLS GCSESIKLQG SHGKQWDVRF VSTNPSLPII CRGCIQFLTD  300
NNLEEGDVCL FELMKSKADV VLKVSILRAA EYEDTIDASN VKKSKRAKLN QNRMCGSQDF  360
STGQNKDDGM FAFDIFSHTY PKWKLKFPKE TEKVTYATRM FNLKNPFFAV ILQFNNYHLL  420
IPVPFARRYL SSGAEFIKLQ DSNGGQWDVQ CSSTNASSSV LRFGRGYNVF LTDKNLEQGD  480
VCLFELIKRN DVLLKVSALR ASEYEDMVHD KEKKLDEIKN RSYRNGHEEE IPELVGRLNE  540
KGKSPSHKLS AEDEGNTEFC NSGTLYYSSK IEKTVMSKES RRAFNAAKKF KTENPAFLVF  600
LRHYHKSFLV VPAEFDTKHL GYECPIFITL EAPNGKRCHV RCIYATDRKK ISGGWSAFFS  660
ENNLEEGDVC VFELIASKDV VLKASIFRAA EFAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-49B3 family protein