PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0017266.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TALE

Protein Properties

Length: 318aa MW: 36413.1 Da PI: 4.9838

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0017266.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.4e-09	261	295	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+++gL++rq+ +WF N+R ++ Rmu_sc0017266.1_g000003.1 261 KWPYPTEADKIALAESTGLDQRQINNWFINQRKRH 295 569*****************************885 PP
2	ELK	23.7	1.2e-08	215	236	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++L rK+++++g+Lk EFs Rmu_sc0017266.1_g000003.1 215 DLKNRLFRKFGSHIGTLKLEFS 236 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MYGLQSAVDY GDKSTDYADK ALMTPENLIL PMDYQSLLSS VAFRDHRVPM MFGSDAGDLY 60 SAISSVPEFR RGEEDVFGPI KAKIASHPSY PRLIEAYIDC QKVGAPPEIA SFLEEIRREN 120 DLYKRERDAA MSTCLGADPE LDEFMETYCD MLVKYKSDLA RPFDEATTFL NKIETQLSNL 180 CIRTLSDEGA VSSEEEFSGG ELEVQEAQAR GEDRDLKNRL FRKFGSHIGT LKLEFSKKKK 240 KGKLPKEARQ ALLHWWSVHY KWPYPTEADK IALAESTGLD QRQINNWFIN QRKRHWRPSE 300 NMQFAVMDNL SGPFFADD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-126	TALE family protein