PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0017071.1_g000007.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

DBB

Protein Properties

Length: 216aa MW: 24335.2 Da PI: 6.4028

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0017071.1_g000007.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.1	1.8e-08	3	43	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +C+ +++ e++ fC ++ lC+ C H+ H+ Rmu_sc0017071.1_g000007.1 3 IRCDVCDKAEATVFCSADEAALCDVCDRRVHHAnklaskHK 43 58**************************9964436666665 PP
2	zf-B_box	22.4	2.6e-07	55	92	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++e + +fC++++ lC++C ++H+ Ht Rmu_sc0017071.1_g000007.1 55 SPHCDICQERRGFFFCQEDRAILCRECDHSIHNAneHT 92 689*****9*******************768876 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MKIRCDVCDK AEATVFCSAD EAALCDVCDR RVHHANKLAS KHKRFFLLQP TCKDSPHCDI 60 CQERRGFFFC QEDRAILCRE CDHSIHNANE HTKKHNRFLL AGVKLSADST LYPTSSSSCS 120 TFSDDIVIIN SSDHARVASK SSTKRPRTRC NEQKFSSSSY KVEENCSISD NGSVISTNSI 180 SEYLMGDQIT EWRVEDLLDV SFDFDGFCEV GSAPYM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	3e-59	DBB family protein