PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0015060.1_g000013.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HB-other

Protein Properties

Length: 242aa MW: 26519.3 Da PI: 5.1354

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0015060.1_g000013.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	16.3	1.7e-05	30	69	2	40
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS- CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkklgLt 40 ++R+t+t++q+++L+el+++ +++++++L++ ++++ Rmu_sc0015060.1_g000013.1 30 STRWTPTTDQIRILKELYYNkGIRAQEKQKKRLTSDVHVP 69 58****************9867778888888888877765 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MEPQTQQPTE DGRSNKAAGS SANMLCRQSS TRWTPTTDQI RILKELYYNK GIRAQEKQKK 60 RLTSDVHVPM QRSGLVGNGT SWKPEDQYIN FGSSLSASAS LAGVMIAFNG QMGNYGGYGS 120 INMEKSFRDC SISAGEGTSS TFFDMNEEQT FMEQRGEDHQ EIETLPLFPM HGKDIFGNMK 180 ITFEGGGGYG YYSGGWGGYN GGSCISLELN LNSYGSTLFS REGVFSAREE TLKKISEAAD 240 SA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-12	WOX family protein