PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0014784.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NZZ/SPL

Protein Properties

Length: 472aa MW: 51318.4 Da PI: 8.1101

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0014784.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	20.4	8.2e-07	13	60	39	87
NOZZLE 39 tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvg 87 + gr sk ++ kqkk rg+gva+le+ ++ee++kk + Rmu_sc0014784.1_g000002.1 13 PTGGFGRSSNSKKTN-KQKKVPQRGLGVAQLEKIRLEEQQKKAASVLTS 60 555678999998775.6677778****************9998654443 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MGKEEITQKC TSPTGGFGRS SNSKKTNKQK KVPQRGLGVA QLEKIRLEEQ QKKAASVLTS 60 PTPPASNSLP SPTKSSPCVP NPAPIRHYQP PSSIPFPSLP SLDLPSPNSI FRPPNAEVVR 120 KPNSISTVPL PNKGTHGFEI PGHGNAVVPN LWNPNCEYNS ADLNKESSSG ILDPGFAFRP 180 SLNNLPTFDN SNAIWALPNF PQRTHQFHHQ PPPPPPSLVN VSSATPLLSS SSVLNFHTEP 240 PSNQSYYSNY TTPMWSEEER MVGMKRLYPF SHDNDAPSIN FKFPTFAPPP MRTDETTSCG 300 NRGGTSNLDP DGNTIFREGS TCSTKISESN SKISIKENGS VNGDFLTLAP PTTNRTCPSP 360 KFNFPPAYLA FHNPEVPDFA SFPYKGSSED TILQSGPSGS TPQQAFYTFI PPAKSQIVKP 420 AATINNCNGG MMDDSRHCFA NKLLHVDCRG SDLVCPIFLS GDPYRSDLHE SL

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MGKEEITQKC TSPTGGFGRS SNSKKTNKQK KVPQRGLGVA QLEKIRLEEQ QKKAASVLTS  60
PTPPASNSLP SPTKSSPCVP NPAPIRHYQP PSSIPFPSLP SLDLPSPNSI FRPPNAEVVR  120
KPNSISTVPL PNKGTHGFEI PGHGNAVVPN LWNPNCEYNS ADLNKESSSG ILDPGFAFRP  180
SLNNLPTFDN SNAIWALPNF PQRTHQFHHQ PPPPPPSLVN VSSATPLLSS SSVLNFHTEP  240
PSNQSYYSNY TTPMWSEEER MVGMKRLYPF SHDNDAPSIN FKFPTFAPPP MRTDETTSCG  300
NRGGTSNLDP DGNTIFREGS TCSTKISESN SKISIKENGS VNGDFLTLAP PTTNRTCPSP  360
KFNFPPAYLA FHNPEVPDFA SFPYKGSSED TILQSGPSGS TPQQAFYTFI PPAKSQIVKP  420
AATINNCNGG MMDDSRHCFA NKLLHVDCRG SDLVCPIFLS GDPYRSDLHE SL