PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0014635.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 262aa    MW: 28638.4 Da    PI: 9.0606
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0014635.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.3e-1175121354
                                HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                ++h+e+ErrRR+riN  +++Lr l+P +     +K++Ka+ L ++++ +k+L
  Rmu_sc0014635.1_g000004.1  75 KNHSEAERRRRERINAHLSTLRGLVPRN-----EKMDKAALLAEVIRQVKEL 121
                                58************************98.....8***********9988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MAFYSFDSNP TIGSDHSSLF NPFTLHGSGG GLTNGSVQLL PHSLVLDSEK GELVKAPARV  60
GKKCVSEAKA LAALKNHSEA ERRRRERINA HLSTLRGLVP RNEKMDKAAL LAEVIRQVKE  120
LKKDSLESSK GFLIPIDADE VKVEHYDSGV GDGIISVRAS ICCEYRSELL SDLKEALDSL  180
HLKMVKAEMA TLGNRVHNVF VLTGYNKGNN NAEAYQLLAS SVHHALSSVL DKASISPEYS  240
PRTTLPTKRR RTSYFDTSSS SS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18186ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.15e-31bHLH family protein