PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0013622.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family EIL
Protein Properties Length: 605aa    MW: 68297.1 Da    PI: 5.2327
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0013622.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3486.12e-148474171354
                                XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                       EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84 
                                +el++rmw+d++ll+rl+e++k     ke  ++++++++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv
  Rmu_sc0013622.1_g000002.1  47 DELERRMWRDRILLRRLREQNKG----KEG-ADNARQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPV 125
                                79******************998....677.777889*********************************************** PP

                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT-- CS
                       EIN3  85 egasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgv 168
                                +gasd+Lr+WWk+kv+fdrngpaaiskyqa+n i++  +++ ++  s++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv
  Rmu_sc0013622.1_g000002.1 126 SGASDNLREWWKDKVRFDRNGPAAISKYQADNSIPGLMEDC-ISVASTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGV 208
                                ************************************99999.669*************************************** PP

                                HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTT CS
                       EIN3 169 epPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnq 252
                                +pPWWPtG+e+ww++l l+ +qg+ppykkphdlkkawkvsvLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l++++q
  Rmu_sc0013622.1_g000002.1 209 SPPWWPTGNEEWWPQLNLA-NQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDINKIRKLVRQSKCLQDKMTAKESATWLAIIHQ 291
                                **************99887.7899************************************************************ PP

                                TTT-S--XXXX..XXXXXXXXXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXX.....................XXXXXXXXXX CS
                       EIN3 253 eekecatvsah..ssslrkqspkvtlsceqkedve.gkkeskikhvqavktta.....................gfpvvrkrkk 312
                                ee +++++ ++  ++ +  +s ++++s  +++dve +++e++  +v+ +k                        + ++ +krk+
  Rmu_sc0013622.1_g000002.1 292 EEVMARKMFPDkcPPLSAGGSGSFVISGTSDYDVEgVDDEQN-VEVEDCKPLLnhfnmgsigqrpqikgelietNSDFGKKRKQ 374
                                ***********85556666****************5555555.556666665479*******************99*****999 PP

                                XXXXXXXXXXX......XXXXXXX.XXXX.XXXXXXXXXXXXX CS
                       EIN3 313 kpsesakvsskevsrtcqssqfrgsetel.ifadknsisqney 354
                                +++e+ +++ ++ ++tc+  q+++s++++ +f d ++++++++
  Rmu_sc0013622.1_g000002.1 375 RQAEEPQMMLNQKVYTCEFLQCPYSDYRIgGFCDITARNNHQM 417
                                99888877777788*************984599****999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    
MGMFEEMGFC GNLDFLSAAA GEGEVVLEQE PEATVEEDYS DEEMDVDELE RRMWRDRILL  60
RRLREQNKGK EGADNARQRQ SQEQARRKKM SRAQDGILKY MLKMMEVCKA QGFVYGIIPE  120
KGKPVSGASD NLREWWKDKV RFDRNGPAAI SKYQADNSIP GLMEDCISVA STPHTLQELQ  180
DTTLGSLLSA LMQHCDPPQR RFPLEKGVSP PWWPTGNEEW WPQLNLANQG PPPYKKPHDL  240
KKAWKVSVLT AVIKHMSPDI NKIRKLVRQS KCLQDKMTAK ESATWLAIIH QEEVMARKMF  300
PDKCPPLSAG GSGSFVISGT SDYDVEGVDD EQNVEVEDCK PLLNHFNMGS IGQRPQIKGE  360
LIETNSDFGK KRKQRQAEEP QMMLNQKVYT CEFLQCPYSD YRIGGFCDIT ARNNHQMSCP  420
YRNNFSPVFA MPNLLDNDKP AGFPLPVAQA KPAVIQQVNQ TSPYNVSGLG LADDGQKMIS  480
ELMSSYDTNT QHSPNPGNLN AVQDHNHQQA KFQYPVNDNF YGQGMVMDRN NVPEPTPMPM  540
LQQVFPSPEV QFDQCKVFDS AFGNNPNDVI PDLRFGSGSQ FSLASPDYNV GNSLLKQDAA  600
SFWYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.10.0EIL family protein