PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0013199.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 414aa MW: 47981.5 Da PI: 8.3818 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 55.7 | 1.6e-17 | 56 | 148 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 +fYn+YAk +GF+vr ++++ s + g++t+ ++vCs +gkr+e+ + +++ r++++etr +C + +kv+ ++ + ++v+++ Rmu_sc0013199.1_g000005.1 56 SFYNAYAKAMGFNVRSDYKRLSiRIIGRVTSLRLVCSAQGKRREKYISnEKRLRKPKKETRFNCPCLFKVRYRSnINAYMVDDF 139 5******************9998999****************99987735667899*****************9899******* PP FAR1 82 eleHnHela 90 + +H+la Rmu_sc0013199.1_g000005.1 140 ITIYSHQLA 148 *******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence |
MDGSYEPSIS DIGLVSQSSI NGSDCNEMQY KGVRYDKLST EDLKGKEFKT VEEAESFYNA 60 YAKAMGFNVR SDYKRLSIRI IGRVTSLRLV CSAQGKRREK YISNEKRLRK PKKETRFNCP 120 CLFKVRYRSN INAYMVDDFI TIYSHQLAQA HESHLLRSHR SVEDHHLALA TSMQRVSVKP 180 CHTYEYIVDR SGGFKNVEFI MKDLYNKLDS RRQEILLEGD AEAALAYMRG KVATDSHFYC 240 KFSIDEDNRM ANMFWRDSNS LVDYTCFGDV LVFDSTYKTN PYEKPLVLFV GSNNHLSTIG 300 FGLSLLMDET IETYTWDLET FISSMNNKRP VAVLTDGDEA MGMAIEVVLP GCPHRLCTWH 360 IAKNARRHLP KNSVFSEFRR CMWDEVTPDG FEKRWQKRHA RRKNVDKTEL ETFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-57 | FAR1 family protein |