PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0013167.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 509aa MW: 53979.6 Da PI: 6.9527

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0013167.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	70.4	2.8e-22	308	370	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L+ eN +L++e+++++ e+++l se+ Rmu_sc0013167.1_g000003.1 308 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKDENATLRSEVNRIRSEYEQLLSEN 370 89**********************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MGSSEMDKPA KEKEKELKTT PPTTQEQQSA TTSAGTVNPD WSGFQAYSPM PPHGFMASSP 60 QAHPHPYMWG VQHIMPPYGT PPHPYVAMYP HGGLYAHPSM PPGSYPFSPF AMPSPNGIVE 120 ASGNTPGSIE ADGKPSEAKE KLPIKRSKGS LGSLNMITGK NNELPKTSGA SANGVYSKSA 180 ESGSEGTSEG SDANSQSDSQ LKSGGRGDSL EGDASQNGGS AHNSQNGTPN SHAVLNPTMA 240 IVPMTAAGAP IAVSGPATNL NIGMDYWGAP SSAMPAIRGK VPTTPVAGGL VTPGSRDGAQ 300 SQLWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEVLKDENA TLRSEVNRIR 360 SEYEQLLSEN ASLKERLGEI PGHEDLRSGR SDQHLSNDTN QIAQTELHGD PTGIVEGKTQ 420 ILWEEEGNGA GKMGCVSADD GAVAPLRPRR CGASCRREAR GRTDQSAVEW SRQRRGCSVA 480 GQVAVVGEVA AQKPATSTSS DLNRCPEAV

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MGSSEMDKPA KEKEKELKTT PPTTQEQQSA TTSAGTVNPD WSGFQAYSPM PPHGFMASSP  60
QAHPHPYMWG VQHIMPPYGT PPHPYVAMYP HGGLYAHPSM PPGSYPFSPF AMPSPNGIVE  120
ASGNTPGSIE ADGKPSEAKE KLPIKRSKGS LGSLNMITGK NNELPKTSGA SANGVYSKSA  180
ESGSEGTSEG SDANSQSDSQ LKSGGRGDSL EGDASQNGGS AHNSQNGTPN SHAVLNPTMA  240
IVPMTAAGAP IAVSGPATNL NIGMDYWGAP SSAMPAIRGK VPTTPVAGGL VTPGSRDGAQ  300
SQLWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEVLKDENA TLRSEVNRIR  360
SEYEQLLSEN ASLKERLGEI PGHEDLRSGR SDQHLSNDTN QIAQTELHGD PTGIVEGKTQ  420
ILWEEEGNGA GKMGCVSADD GAVAPLRPRR CGASCRREAR GRTDQSAVEW SRQRRGCSVA  480
GQVAVVGEVA AQKPATSTSS DLNRCPEAV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	325	331	RRSRLRK
2	325	332	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-157	bZIP family protein