PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0012980.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 443aa MW: 48226.5 Da PI: 8.704

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0012980.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101	7.5e-32	261	316	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Rmu_sc0012980.1_g000001.1 261 KQRRNWSPELHRRFLHALQQLGGSHTATPKQIRELMKVDGLTNDEVKSHLQKYRLH 316 79****************************************************97 PP
2	Myb_DNA-binding	43.7	6.3e-14	263	314	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r +W++e++ ++++a +qlGg t+k I + m g+t ++ks++qky+ Rmu_sc0012980.1_g000001.1 263 RRNWSPELHRRFLHALQQLGGShtaTPKQIRELMKvDGLTNDEVKSHLQKYR 314 679***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MLIESTEEMQ GSKMSLYVKA LEEERQKIQV FQRELPLCLE LVTQAIERCK QELSDNSIEY 60 RHGQSECSEQ TSSEGHVFEE FIPLKRSSCS DSDNDEELEE SDHQQIKIDD KDKSNSGDKK 120 KSDWLRSVQL WNTTPDLPQK EELPRKALVV EVKRNGGAFQ PFQREKGIGK TNGAVAKSPA 180 SAPATSSTAD TELPRKALVV EVKRNGGAFQ PFQREKGIGK TNGAVAKSPA SAPATSSTAD 240 TVSGGSGGGN SKKEDKEGQR KQRRNWSPEL HRRFLHALQQ LGGSHTATPK QIRELMKVDG 300 LTNDEVKSHL QKYRLHTRRP TPTIHNNNIN NNSNAQAPQF VVVGGIWVPP QDYNAAVAAA 360 NTAPGEAARV VAAANGIYAP VASTPSTVTQ VSPSAMHRPR PKKPEPSSHS EERASHSGEG 420 RGHSNSTATS PSSTHTPASP PVC

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MLIESTEEMQ GSKMSLYVKA LEEERQKIQV FQRELPLCLE LVTQAIERCK QELSDNSIEY  60
RHGQSECSEQ TSSEGHVFEE FIPLKRSSCS DSDNDEELEE SDHQQIKIDD KDKSNSGDKK  120
KSDWLRSVQL WNTTPDLPQK EELPRKALVV EVKRNGGAFQ PFQREKGIGK TNGAVAKSPA  180
SAPATSSTAD TELPRKALVV EVKRNGGAFQ PFQREKGIGK TNGAVAKSPA SAPATSSTAD  240
TVSGGSGGGN SKKEDKEGQR KQRRNWSPEL HRRFLHALQQ LGGSHTATPK QIRELMKVDG  300
LTNDEVKSHL QKYRLHTRRP TPTIHNNNIN NNSNAQAPQF VVVGGIWVPP QDYNAAVAAA  360
NTAPGEAARV VAAANGIYAP VASTPSTVTQ VSPSAMHRPR PKKPEPSSHS EERASHSGEG  420
RGHSNSTATS PSSTHTPASP PVC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68670.1	3e-72	G2-like family protein