PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0012710.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 302aa MW: 34565.4 Da PI: 9.0503 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 62.7 | 1.1e-19 | 7 | 90 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHn 86 fYn+YAke+GFs+r ++s +s ++++ +r++v +k+g ++ e +k r+r ++gCka++ v ++k +g++ ++ +++ Hn Rmu_sc0012710.1_g000001.1 7 FYNRYAKEAGFSIRSHSSVTS-KDKKQLMREYVYYKQGDSKVEGEK-----RKRGLPKVGCKARIAVVRKKeSGRYAISVFVEAHN 86 ***************999999.55558999*********9998877.....999***********9888777************** PP FAR1 87 Hela 90 H+l+ Rmu_sc0012710.1_g000001.1 87 HPLT 90 **97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MIYVAAFYNR YAKEAGFSIR SHSSVTSKDK KQLMREYVYY KQGDSKVEGE KRKRGLPKVG 60 CKARIAVVRK KESGRYAISV FVEAHNHPLT SPPRVHLLRS HHCVSEVNTV LSQQLSLVNV 120 EKHKQFEFFG VQAGGIQNIG FIQRDLYNYG RTCREEKKGR DGDLLYMHFE NEKEKDSSFV 180 YTMDGDEENR VIRCFWADSI SRRAYSFYGD VVIFDTTCNT NRYGMIFPPF TGVNNYGQAI 240 IFACAFLNDE TANTFVSLFK EFLNAMPGDA QENAPKMIIT DQDLAMTKAI AVGTFLINFM 300 RS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-50 | FAR1 family protein |