PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0012533.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 351aa MW: 39168.6 Da PI: 8.8538

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0012533.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.2	4.9e-17	30	90	2	56
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+ +t++q+++L++l+ + + p+ e+ ++++ +l +++ ++V++WFqN+Ra+ek Rmu_sc0012533.1_g000006.1 30 NTRWLPTTDQIRILKKLYDEkgVKSPTVEQVQRITLQLkwygQIENKNVFYWFQNQRAREK 90 58***************7679***********************************9 PP
2	Wus_type_Homeobox	95.1	6e-31	29	93	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW Pt++Qi+iL++ly+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN++aRe+ k+ Rmu_sc0012533.1_g000006.1 29 SNTRWLPTTDQIRILKKLYDeKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWFQNQRAREKLKK 93 689**************989**************************************885 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MEPQNRHPTE DGGSNKVAES SPNMHCKQSN TRWLPTTDQI RILKKLYDEK GVKSPTVEQV 60 QRITLQLKWY GQIENKNVFY WFQNQRAREK LKKMNLTSDV QVPKQRSGLV GGSINLNFGS 120 TSSADVGGSI MEQRGEDHQE IKTLSLFPMH GEDIFGNMKT TSDGGGGHGG GSYISLELSI 180 SCPKSLIKGL MPLSRISFQH FLQQSDDDFV AGLRLTVRLS IIRTGMDELY SPFLCQFINF 240 TTHESCPPRP SSCGPRLNNG LHRNIRDMLD RPMSLAVQTT FSECDAILQD TGPKISMSSE 300 QPSHLLTCLM STANARMNFA HKLFRFAAIN TSEVYAIFAA SSQLVTSKKV I

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MEPQNRHPTE DGGSNKVAES SPNMHCKQSN TRWLPTTDQI RILKKLYDEK GVKSPTVEQV  60
QRITLQLKWY GQIENKNVFY WFQNQRAREK LKKMNLTSDV QVPKQRSGLV GGSINLNFGS  120
TSSADVGGSI MEQRGEDHQE IKTLSLFPMH GEDIFGNMKT TSDGGGGHGG GSYISLELSI  180
SCPKSLIKGL MPLSRISFQH FLQQSDDDFV AGLRLTVRLS IIRTGMDELY SPFLCQFINF  240
TTHESCPPRP SSCGPRLNNG LHRNIRDMLD RPMSLAVQTT FSECDAILQD TGPKISMSSE  300
QPSHLLTCLM STANARMNFA HKLFRFAAIN TSEVYAIFAA SSQLVTSKKV I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	2e-25	WOX family protein