PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0011990.1_g000010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | YABBY | ||||||||
Protein Properties | Length: 185aa MW: 21182.5 Da PI: 5.125 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 117.1 | 2.9e-36 | 23 | 131 | 67 | 169 |
YABBY 67 lkeelleelkveeenlksnvekeesastsvssekl......senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasn 144 +++ +++k++e +++ +e + +++s ++ +++e +++ + v++PPekrqr+Psaynrfikeeiqr+ka+n Rmu_sc0011990.1_g000010.1 23 QLPPISQHEKDQEICVEEVEEVKYPGLGDMRSPSMavsnnsENEEYTNITLNHIVNKPPEKRQRAPSAYNRFIKEEIQRLKAEN 106 4455666666666666655555555555544444444432123333444445569***************************** PP YABBY 145 PdishreafsaaaknWahfPkihfg 169 P+++h+eafs+aaknWa fP++ ++ Rmu_sc0011990.1_g000010.1 107 PSMTHKEAFSTAAKNWAQFPPVQYK 131 *********************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MNVGECAMQQ FVKIGHSQMW SLQLPPISQH EKDQEICVEE VEEVKYPGLG DMRSPSMAVS 60 NNSENEEYTN ITLNHIVNKP PEKRQRAPSA YNRFIKEEIQ RLKAENPSMT HKEAFSTAAK 120 NWAQFPPVQY KIDGPDHGES SSQLAREDQN VTWNSDVTDQ VQEDGGVFRE RKAPRQSIWA 180 RTPIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 9e-40 | YABBY family protein |