PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0011976.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 150aa MW: 16555 Da PI: 4.906 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.2 | 2e-15 | 31 | 122 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+ +l +s+v+ ++++++p k ++ +s+ ++ + g++We++++ ++ ++++ + Wk Fv++n+Lk+gD +vF+l Rmu_sc0011976.1_g000004.1 31 FDIILAKSHVNPKCQMSIPSKLY-PLLLS--CSVPVV-LTFGGKTWEMTCNTANNAQKFFDRPSWKAFVDDNNLKVGDGCVFEL 110 6678899**************98.33333..665555.6679********99*******************************9 PP -SSSEE..EEEE CS B3 85 dgrsefelvvkv 96 ++ s+++lv++v Rmu_sc0011976.1_g000004.1 111 TECSSTKLVFRV 122 866888777765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
MGDPASQSSS SDPTIELRGD EFWPLSGKPF FDIILAKSHV NPKCQMSIPS KLYPLLLSCS 60 VPVVLTFGGK TWEMTCNTAN NAQKFFDRPS WKAFVDDNNL KVGDGCVFEL TECSSTKLVF 120 RVQILRGEIP AQLLDKVSGE NAEKPLVILD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G33280.1 | 5e-10 | B3 family protein |