PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Rmu_sc0011974.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 111aa MW: 12580.8 Da PI: 10.5448 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.5 | 1.6e-15 | 18 | 111 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 ffkv +p +++++ + ++p f ++h + +++ ++ + sg + ++vkl + ++ +++kGW+ F+++n++ +gD++ F Rmu_sc0011974.1_g000003.1 18 FFKVILPGYNTEQ-LYSIPTAFYRKHLS--AGNYEVAFLKISGgtKWYKVKL--VPSLQTAFMSKGWSVFAHDNQIVVGDVCAF 96 7888888777776.69**********43..3567899999777655558999..****************************** PP EE-SSSEE..EEEEE-S CS B3 83 kldgrsefelvvkvfrk 99 +l++ ++vv+++rk Rmu_sc0011974.1_g000003.1 97 ELVK--ANKMVVHILRK 111 *986..66679*99986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 111 aa Download sequence |
MARRIAKNGG IKEERPSFFK VILPGYNTEQ LYSIPTAFYR KHLSAGNYEV AFLKISGGTK 60 WYKVKLVPSL QTAFMSKGWS VFAHDNQIVV GDVCAFELVK ANKMVVHILR K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G49480.1 | 1e-09 | B3 family protein |