PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0011674.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 501aa MW: 57775.3 Da PI: 4.3049 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 81.2 | 2.2e-25 | 7 | 80 | 55 | 128 |
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 e ewyfFs+rd++y++g+r+nr++k gyWkat +d+ +++++ge++g k L fy+g++ +g+kt+W mheyr+ Rmu_sc0011674.1_g000001.1 7 EIEWYFFSSRDRRYPNGSRPNRSAKGGYWKATKRDEIITAQGGEEIGFKMHLEFYEGTHAQGRKTNWKMHEYRI 80 459*********************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 501 aa Download sequence |
MYPRIREIEW YFFSSRDRRY PNGSRPNRSA KGGYWKATKR DEIITAQGGE EIGFKMHLEF 60 YEGTHAQGRK TNWKMHEYRI KEENEENDIG PPQNTNKGEG ISMRLDDWVL CKIYIKKNFK 120 VDTDSNSLKT SDNSDQVVLP VTNVTTSRDC QNKLAIQHEV QDQSLNASQF DHNGFSTLTN 180 YRDVESSSSN FWNQNYTDDY DTYLMQMSRD PLSSRFFSSP FPLQSSTDQI CTELEPVDDK 240 ISEVDPSSML PAHVRECDEN MSENKNQNYT DDYDTYLMQM SRDPLSSRFF SSPFPLQSST 300 DQICTELEPV DDKISEVDPS SMLPAHVREC DENMSENKNQ NYTDDYDTYL MQMSRDPLSS 360 RFFSSPFPLQ SSTDQICTEL EPVDDKISEV DPSSMLPAHV RECDENMSEN KNQNYTDDYD 420 TYLMQMSRDP LSSRFFSSPF PLQSSTDQIC AGLEPVDDKI SQVDPSSIVL PAHVREYDNR 480 ACKAEPIQPA VRDEGDDHVS K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.1 | 3e-34 | NAC family protein |