PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0011230.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 283aa MW: 29832.1 Da PI: 7.0021

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0011230.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119	1.8e-37	33	89	4	60
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + l+cprC+st+tkfCyynny+l+qPr+fCk+CrryWt+GGalrnvPvGgg+r++k Rmu_sc0011230.1_g000001.1 33 DPLPCPRCNSTQTKFCYYNNYNLAQPRHFCKGCRRYWTRGGALRNVPVGGGTRNKKP 89 5689*************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MPTSTTPPEV SEMKRPRLIQ SMPAAYPPPS SADPLPCPRC NSTQTKFCYY NNYNLAQPRH 60 FCKGCRRYWT RGGALRNVPV GGGTRNKKPK LPHRASSSNS SSSPSSSSLT HETTAPNKPT 120 SDSAVEKPDL PSDQQPQQQQ LLNLNDNVTS EGGFSFLTMM NAQEQPGFLS LGGYGYGSGF 180 AHGFQQGYGY GARAAGVDFP MEMAGAFAGV YGVSGAATSS GVDINTWQMA VADHEGQGGG 240 LVDWPGVQIL DSVPAVSGGG GGVKEEKVAA DPSTDPCLNF PAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	9e-27	Dof family protein