PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0011148.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 175aa MW: 19310.2 Da PI: 4.4009 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.9 | 3.9e-09 | 7 | 44 | 24 | 57 |
S--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 24 ypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 p+ e+++e+ +l ++++++V++WFqN +a+e++ Rmu_sc0011148.1_g000002.1 7 CPTPEQIQEICLNLqqygEIEDKNVFFWFQNLKARERQ 44 599*********************************97 PP | |||||||
2 | Wus_type_Homeobox | 61.8 | 1.4e-20 | 7 | 45 | 26 | 64 |
Wus_type_Homeobox 26 tPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 P+ e+iq+i +L++yG+iedkNVf+WFQN kaRerqk Rmu_sc0011148.1_g000002.1 7 CPTPEQIQEICLNLQQYGEIEDKNVFFWFQNLKARERQK 45 699***********************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MGRSRTCPTP EQIQEICLNL QQYGEIEDKN VFFWFQNLKA RERQKLREFR NVRVGGSLDL 60 NFGSTSSTDD GRSIDLNFGS PGSPSTDRSI DLNFGSRVGY GVDGSIMDQR GEYHQEIETL 120 PLFPMHGENI FGNMKTTSEG GSGYGYYSGG WDDNNGGSCI SLELSLYSSG AADMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05770.1 | 5e-14 | WOX family protein |