PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0011109.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 278aa    MW: 31807.6 Da    PI: 7.3633
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0011109.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.71.7e-1763152290
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 
                                +Y+ Y++ +GF vrk++ ++    g++t+r++vC kegkr+ +  + +++ r++r+etr +C a    + +k +g++ vt++++
  Rmu_sc0011109.1_g000005.1  63 WYRMYGTAIGFGVRKQRVTRG-IGGRVTRRRMVCCKEGKRDAKWLEkEDRVRNPRNETRENCLAACCFHYNKdSGTYFVTEFKT 145
                                79**************99997.9999**************99876635778899**********999999998*********** PP

                       FAR1  84 eHnHela 90 
                                eH+Hela
  Rmu_sc0011109.1_g000005.1 146 EHSHELA 152
                                *****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MEESPVQETM EPDEEVEDSN SNINATTEGV SPSSLPEGEN FKELTADDVV GREFPTVEDA  60
ERWYRMYGTA IGFGVRKQRV TRGIGGRVTR RRMVCCKEGK RDAKWLEKED RVRNPRNETR  120
ENCLAACCFH YNKDSGTYFV TEFKTEHSHE LAKPKEIHFI RSNRCVSNAD LAHVNAMRSC  180
SISTSRAYDY IVNTSGGFEF VGYTSKDMFN KMDADRRAKR IDGDAQAAIA YMNAKAIEDP  240
GFMCKFSVDV DGRLANLFWR DSTSLYDQKK ERKKKTMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-24FAR1 family protein