PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0010871.1_g000026.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | bHLH | ||||||||
Protein Properties | Length: 217aa MW: 24641.2 Da PI: 4.7423 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12 | 0.00039 | 52 | 92 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++Er+RR+++ +++ +Lr+l+ ka +i+e + YI +Lq Rmu_sc0010871.1_g000026.1 52 KNLKAERKRRAKLSDRLLKLRSLMNKA-----------TIVEDSITYIYELQ 92 56689*****************98665...........66666666666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MLVDHYLNDM EFVGSALDEL CLSPDQEGSS QQGRMGRRRY NDEEDDSIYK SKNLKAERKR 60 RAKLSDRLLK LRSLMNKATI VEDSITYIYE LQKNVNMLQD QLFEMEALSS LEVPEPKPRK 120 EEIDAAEEMK KYGIQAEVSV TQIDGNKLWI KAVLAKKRGG FTKLIEAMTE FGFELTDTSV 180 TTSNGAMLVS SCVIGFHCDT LAVEQTRELM LDIINGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21330.1 | 3e-31 | bHLH family protein |