PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0010739.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 332aa    MW: 36404.1 Da    PI: 7.8756
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0010739.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.12.6e-17120180357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                +R+t+t+ ql++L+ l++   ++yp+ e+++e+  +l    ++++++V++WFqN +a+e++
  Rmu_sc0010739.1_g000005.1 120 NRWTPTPAQLRILQGLYYDkgHKYPTPEQIQEICLHLkpygQIEDKNVFFWFQNLKARERQ 180
                                7****************9557**************************************97 PP
2Wus_type_Homeobox93.22.3e-30118181264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp Q++iL+ ly+ +G + P+ e+iq+i  +L+ yG+iedkNVf+WFQN kaRerqk
  Rmu_sc0010739.1_g000005.1 118 TTNRWTPTPAQLRILQGLYYdKGHKYPTPEQIQEICLHLKPYGQIEDKNVFFWFQNLKARERQK 181
                                579***************9889*****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MQLLLFKRNH PNNPAQNTQN CCRNPAHNST QNYFRDSAQR ASNHNYSKGI DTGQAHVQPT  60
CTAYPFRDLR QSNLLSAKAV CHSALRFVWS PYKLSTGQQL FRNNQAAGSS ANTPIRPTTN  120
RWTPTPAQLR ILQGLYYDKG HKYPTPEQIQ EICLHLKPYG QIEDKNVFFW FQNLKARERQ  180
KLKEFRKVRV GGSLDLNFGS TSSTDDGRSI DLNFGSTGST GDDGSIDLTL GSCVGYGVDP  240
YSSSPFNANI STTSFGPTGG QFSMEQRGGD HQEVETLPLF PVHGEDVLGN PNTASEEGSA  300
YGYYFGGSGG YNSGSHVSLE LSLNPSGAAD LA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-20WOX family protein