PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0010665.1_g000023.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 330aa MW: 36332.3 Da PI: 7.5463

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0010665.1_g000023.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.1	7.4e-32	138	191	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Rmu_sc0010665.1_g000023.1 138 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 191 9****************************************************7 PP
2	Myb_DNA-binding	47.5	4.1e-15	139	190	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ Rmu_sc0010665.1_g000023.1 139 RMRWTTTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 190 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MMYLSSNSNP IMRTTSSPLP DLSLQISPPS DHYEMGLARK ALNGDRSSTT DSTSSGSDLS 60 HENVLYHLDQ RTNYNLTSAE PEPNLSLGLE MKDIISSSTS STPLLPRNFN HHHPQIYGRD 120 FKRSARTVGN VKRSVRAPRM RWTTTLHAHF VHAVQLLGGH ERATPKSVLE LMNVKDLTLA 180 HVKSHLQMYR TVKSTDHKGT GNEGQQIDMG LDQNPGNNNA QVNGSVLPCD SEKAINSPPT 240 LLLQNPSRGS WHSARETNGS CKLSHGNSLT YSHSPSSNGT KVEEEDSGSG RQLDCSSLSS 300 SDHMYLNLEF TLGRPSGEWS MLNTLNLQMT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	8e-64	G2-like family protein