PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0010384.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 409aa MW: 46590.4 Da PI: 4.9833 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 128 | 7.5e-40 | 10 | 157 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............kvkaeekewyfFskrdkkya 69 lp+GfrF+P+deel+++yL+kk ++k+ e+e +i+e++++++eP+dLp+ ++++ + ewyfFs+r k++ Rmu_sc0010384.1_g000005.1 10 LPKGFRFQPSDEELLSHYLEKKNQRKDPEVEAIIPEINVCEYEPRDLPSlvfrravfldrewftMADSPDMEWYFFSPRVFKHS 93 799***************************999***************66899999999998855555677*******987766 PP NAM 70 ..tgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128 +++r+nr+t++gyWk++gkd++++++ +++++g k++L+fy+ +k +ktdWv+hey l Rmu_sc0010384.1_g000005.1 94 ksKSTRSNRTTEEGYWKKQGKDRRIMTRarSDKQIGGKRILTFYQTdGVQKKQKTDWVIHEYYL 157 33688**********************9888889**********763456679*********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 409 aa Download sequence |
MMMSSGRITL PKGFRFQPSD EELLSHYLEK KNQRKDPEVE AIIPEINVCE YEPRDLPSLV 60 FRRAVFLDRE WFTMADSPDM EWYFFSPRVF KHSKSKSTRS NRTTEEGYWK KQGKDRRIMT 120 RARSDKQIGG KRILTFYQTD GVQKKQKTDW VIHEYYLTKT DSNEQIGDFV LCRLKKKSDK 180 SDHDEQEGPC YSMAFINVEN QASKELGNVL SISVEGQPDS GNSSDSNMVE ELLDEPGNQP 240 PPPQLQSPIK LGNVSHTTNV HIDECRKRKY QFADNDSSES SPTKNNHIST NDVDELVSNT 300 SSYSESHAAD AIPKEYSQPG ENLGSDLFQS LEPLSVNREP RDFSHHNNFI GWDDLPYLIE 360 GIDSSLEKFS DTNIDGGSSD RNTEVVYGSV NNYSTFSGGS TIQKWGGLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 8e-28 | NAC family protein |